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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825368.1_cds_XP_016502296.1_15951
CDS Infomation

[gene=LOC107820519] [db_xref=GeneID:107820519] [protein=BRCA1-associated RING domain protein 1-like] [protein_id=XP_016502296.1] [location=complement(join(78531..78875,79038..79156,79495..79660,80347..80437,81592..81710,81810..81996,82501..82601,82837..83109))] [gbkey=CDS]
Sequence

ATGCGCTGCATAGTCGGGCGTGAAGATATTTTTCATGAAAGGGATGTGAAGAGGCAAACG
AGACTAAGTTCTGGTTCGTCACAAATGAGCTTAGAAAGTCATGGTCATATTCAACTAAGA
TGTCCTAGTTCTGAAATTGTTGCTAATTCCAACTGCAATATGGAGTATAAAAATAGTGAA
TCTCCTTCTGTTGCTCAGCCAAAATCAGTTTCAGATCAACATGCTCTGAAAGGAAGTGTT
TGTTGTTTCTGTCATTCGCCTAAGACCACAAAGGGAACTGGACAGTTCTTGTACTATGCT
AATGGAAAGGAAGTGGTGGAAAATGTCTCTTCTCCTTCCAAAGTCATATGTGTGCACAGT
AAATGCATTGAATGGACACCTCAAGTATTTTATGATGGAGATACTATAAAGAACTTGAAA
AGTGAATTGGCAAGAGCTGCAAAACTCAAATGTAGTAGTTGTGGCATGAAAGGTGCAGCA
CTTGGCTGCTACATAAAATCTTGCCGGAGGAGTTATCACGTGCCCTGTGCATTTGAAATC
CAGGATTGTCGATGGGATATGGACAACTATCTCATGCTGTGCCCAATTCATAAATCTACT
AAATTTCCAACTGAGAAGTCAAATTCCAGGAAGCACGTTAGGAGGGAAGTGCATCGAGCA
ACTTCAGATATTCCTCCTCTAACCACTGAGCAATTGAGTTTTTGGGCAAGATCATCAGGT
GGACCCAAAGAATGGGTTCTTTGTGGGTCTGCTCTATCCTCAGAAGAGAAGTATATGTTG
GTGACATTTGCTAATATGTGCGGTGCGACTGTGTGCAAGTTTTGGAAACCAAATGTCACA
CATGTTGTTGCAGCAACAGATGAAAAGGGTGCATGCACCAGAACATTTAAAGTTCTCATG
GCAATTTTGAGTGGAAAATGGATCCTAACGATGGACTGGGTAAAAGCTTGTATTGCAGCA
AATGGTCCAGTAAAGGAAGAACCTTATGAAATAAGTCTAGACAATCACGGCTGTTCTGGG
GGCCCCAAAGCTGGAAGGCTCTGGGCCTCAACTAATGCGCCAAAGCTTTTTGATGGTTTC
AGGTTTTATTTGAGTGGGGATTTTGTGCCAACTTACAAAGTTGACCTGTTAGATCTAGTT
GAGAAGGCTGGAGGTGCTAGCATTCAGAGCAAGGAACAGTTGGTGGAACAGACTCATGCT
GCACAGGAAACTCACCCACCTTATCTAGTTGTATACAACTGTGATCCCCCACGGGGTTGC
ACGTTTGAAGAAGAAAGCAATATTTTGCAGCAAAGATTAGCTGAAGCTGAGGATCTCGCC
AAGCAAATTGGTTGTCAGGTCATTCAGCATACTTGGATTCTGGAGTGTGTTGCTGCATGT
AAACTGGTACCTTTTTGCTGA

Peptide Sequence

PEP ID

XP_016502296.1
PEP Infomation

PREDICTED: BRCA1-associated RING domain protein 1-like [Nicotiana tabacum]
Sequence

MRCIVGREDIFHERDVKRQTRLSSGSSQMSLESHGHIQLRCPSSEIVANSNCNMEYKNSE
SPSVAQPKSVSDQHALKGSVCCFCHSPKTTKGTGQFLYYANGKEVVENVSSPSKVICVHS
KCIEWTPQVFYDGDTIKNLKSELARAAKLKCSSCGMKGAALGCYIKSCRRSYHVPCAFEI
QDCRWDMDNYLMLCPIHKSTKFPTEKSNSRKHVRREVHRATSDIPPLTTEQLSFWARSSG
GPKEWVLCGSALSSEEKYMLVTFANMCGATVCKFWKPNVTHVVAATDEKGACTRTFKVLM
AILSGKWILTMDWVKACIAANGPVKEEPYEISLDNHGCSGGPKAGRLWASTNAPKLFDGF
RFYLSGDFVPTYKVDLLDLVEKAGGASIQSKEQLVEQTHAAQETHPPYLVVYNCDPPRGC
TFEEESNILQQRLAEAEDLAKQIGCQVIQHTWILECVAACKLVPFC

Transcript Sequence

Gene sequence data has not been registered.